error while running npm install

When running npm install I get the following error:

npm ERR! code 1npm ERR! Command failed: /usr/bin/git checkout ~3.9.0npm ERR! error: pathspec '~3.9.0' did not match any file(s) known to git.npm ERR!

node and npm versions:

$ node -vv10.4.0$ npm -v6.1.0

I tried downgrading npm and also running it on two different machines but got the same results.

Here are the dependencies in package.json:

"dependencies": {"@bower_components/jquery": "jquery/jquery-dist#3.3.1","@bower_components/lodash": "lodash/lodash#~3.9.0","autosize": "^4.0.2","babel-core": "^6.26.3","babel-jest": "^23.0.1","babel-loader": "^7.1.4","babel-plugin-add-module-exports": "^0.2.1","babel-plugin-rewire": "^1.0.0","babel-plugin-transform-object-rest-spread": "^6.26.0","babel-polyfill": "^6.26.0","babel-preset-es2015": "^6.24.1","babel-preset-react": "^6.24.1","chai": "^4.1.2","chart.js": "^2.7.2","chartkick": "^2.3.5","chosen-js": "^1.8.5","core-js": "^2.5.7","create-react-class": "^15.6.3","del": "^3.0.0","enzyme": "^3.3.0","enzyme-adapter-react-15": "^1.0.2","eslint": "^4.19.1","eslint-config-airbnb": "^16.1.0","eslint-plugin-import": "^2.12.0","eslint-plugin-jsx-a11y": "^6.0.3","eslint-plugin-react": "^7.8.2","event-stream": "^3.3.4","gulp": "^3.8.7","gulp-autoprefixer": "^4.0.0","gulp-cached": "^1.1.1","gulp-clean": "^0.3.0",},"scripts": {"test": "jest","start": "gulp dev","hot": "gulp hot-dev","build": "gulp build"}